{"id":1095,"date":"2017-05-01T14:21:46","date_gmt":"2017-05-01T05:21:46","guid":{"rendered":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/?p=1095"},"modified":"2017-05-01T22:25:39","modified_gmt":"2017-05-01T13:25:39","slug":"installing-charmm-c41-on-macos-sierra","status":"publish","type":"post","link":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/2017\/05\/01\/installing-charmm-c41-on-macos-sierra\/","title":{"rendered":"Installing charmm c41 on macOS Sierra"},"content":{"rendered":"<p>Register and download <a href=\"http:\/\/charmm.chemistry.harvard.edu\/\">charmm c41 source code<\/a>.<\/p>\n<pre class=\"command-line\"><code class=\"language-bash\" data-line=\"\">$ brew install gcc openmpi #GCC6\n\n$ ln -s \/usr\/local\/bin\/gcc-6 \/usr\/local\/bin\/gcc\n$ ln -s \/usr\/local\/bin\/g++-6 \/usr\/local\/bin\/g++\n<\/code><\/pre>\n<pre class=\"command-line\"><code class=\"language-bash\" data-line=\"\">$ tar xvzf charmm.tar.gz\n$ cd charmm\n$ export MAKE_COMMAND=&quot;make -j4&quot;\n$ .\/install.com gnu M  #using gnu C compiler not osx clang. Command &quot;.\/install.com osx&quot; returned an error &quot;clang: error: unknown argument: &#039;-fabi-version=0&#039;.&quot;   &quot;M&quot; specifies MPI-enabled version.\n\n$ .\/install.com gnu\n<\/code><\/pre>\n<p>(\u4e86)<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Register and download charmm c &#8230;<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"om_disable_all_campaigns":false,"_uag_custom_page_level_css":"","_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"_uf_show_specific_survey":0,"_uf_disable_surveys":false,"_locale":"","_original_post":"","footnotes":""},"categories":[5],"tags":[],"class_list":["post-1095","post","type-post","status-publish","format-standard","hentry","category-5","ja"],"aioseo_notices":[],"uagb_featured_image_src":{"full":false,"thumbnail":false,"medium":false,"medium_large":false,"large":false,"1536x1536":false,"2048x2048":false,"onepress-blog-small":false,"onepress-small":false,"onepress-medium":false},"uagb_author_info":{"display_name":"RCY","author_link":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/author\/charlesy\/"},"uagb_comment_info":0,"uagb_excerpt":"Register and download charmm c ...","_links":{"self":[{"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/posts\/1095","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/comments?post=1095"}],"version-history":[{"count":7,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/posts\/1095\/revisions"}],"predecessor-version":[{"id":1108,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/posts\/1095\/revisions\/1108"}],"wp:attachment":[{"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/media?parent=1095"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/categories?post=1095"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.ag.kagawa-u.ac.jp\/charlesy\/wp-json\/wp\/v2\/tags?post=1095"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}